Information for motif37


Reverse Opposite:

p-value:1e0
log p-value:-4.881e-01
Information Content per bp:1.653
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif49.2
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets453.0 +/- 385.7bp
Average Position of motif in Background518.8 +/- 488.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGAGCC------
NNANTTGACCCCTNNNN

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCTTGAGCC
GCGCCTGCGCA

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CGCTTGAGCC
-----CAGCC

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCTTGAGCC------
TGTCGTGACCCCTTAAT

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCTTGAGCC------
NNCNTGACCCCGCTCT

NRF1/Promoter/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGCTTGAGCC
GTGCGCATGCGC-

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGAGCC------
NNNNTTGACCCCTNNNN

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCTTGAGCC
CTGCGCATGCGC-

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCTTGAGCC------
NNNNTGACCCGGCGCG

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCTTGAGCC
RSCACTYRAG--