Information for motif38


Reverse Opposite:

p-value:1e0
log p-value:-2.079e-02
Information Content per bp:1.591
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif147.8
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets601.2 +/- 530.6bp
Average Position of motif in Background614.4 +/- 503.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CCCACGTG
NCCACGTG

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG---
-CCACGTGGNN

MA0104.3_Mycn/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:CCCACGTG
GCCACGTG

c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG---
-CCACGTGGNN

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:CCCACGTG--
--CACGTGNC

MA0004.1_Arnt/Jaspar

Match Rank:6
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:CCCACGTG
--CACGTG

Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CCCACGTG----
ACCACGTGGTNN

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:CCCACGTG--
--CACGTGDC

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CCCACGTG------
TGACCACGTGGTCGGG

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG---
-TCACGTGACC