Information for motif4


Reverse Opposite:

p-value:1e-15
log p-value:-3.644e+01
Information Content per bp:1.853
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets371.2 +/- 252.5bp
Average Position of motif in Background763.8 +/- 101.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGATCTGTG
ANCAGGATGT---

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAGGATCTGTG
AACAGGAAGT---

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACAGGATCTGTG
ACAGGATGTGGT

MA0098.2_Ets1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAGGATCTGTG
NNNACAGGAAGTGGN

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACAGGATCTGTG
ACAGGAAGTG--

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGATCTGTG
CACAGN-------

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAGGATCTGTG
ACAGGAAGTG--

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAGGATCTGTG
NACAGGAAAT---

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGATCTGTG
NACAGGAAAT---

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACAGGATCTGTG
-AAGGATATNTN