Information for motif7


Reverse Opposite:

p-value:1e-14
log p-value:-3.347e+01
Information Content per bp:1.460
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets474.9 +/- 388.7bp
Average Position of motif in Background699.6 +/- 528.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GATCTTAGAGTA
NTTTCTNAGAAA-

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GATCTTAGAGTA--
----CTYRAGTGSY

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GATCTTAGAGTA---
NANTATTATAATTNNN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GATCTTAGAGTA-
---CCAAAAATAG

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GATCTTAGAGTA---
NCGTATTATAATCNTA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GATCTTAGAGTA---
-----TTGAGTGSTT

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----GATCTTAGAGTA
NNNGTGACCTTTGNNN-

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------GATCTTAGAGTA
NNTNNCAATATTAG----

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GATCTTAGAGTA--
GNNACCGAGAATNNN

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GATCTTAGAGTA--
--GGTTAGAGACCT