Information for motif8


Reverse Opposite:

p-value:1e-13
log p-value:-3.166e+01
Information Content per bp:1.649
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets420.1 +/- 327.0bp
Average Position of motif in Background745.4 +/- 514.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTGTATACACTC----
NSTGTTTRCWCAGBNNN

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGTATACACTC
CNTGTTTACATA-

MA0157.1_FOXO3/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTGTATACACTC
-TGTAAACA---

MA0047.2_Foxa2/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGTATACACTC-
-TGTTTACTTAGG

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGTATACACTC
-TGTTTACTTT-

MA0148.3_FOXA1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGTATACACTC
TCCATGTTTACTTTG

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGTATACACTC
-TGTTTACTTT-

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGTATACACTC
TNTGTTTACTT--

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGTATACACTC
NYYTGTTTACHN--

MA0480.1_Foxo1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTGTATACACTC
TCCTGTTTACA---