Information for motif12


Reverse Opposite:

p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.820
Number of Target Sequences with motif205.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif565.9
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets383.7 +/- 315.0bp
Average Position of motif in Background429.2 +/- 398.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----AGTTAACTCA---
ACTTAGTTAACTAAAAA

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AGTTAACTCA---
CCTTAGTTAACTAAAAT

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AGTTAACTCA-
ANNNCTAGTTAACNGNN

MA0099.2_JUN::FOS/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGTTAACTCA
---TGACTCA

PH0045.1_Hoxa1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAACTCA-
ACGGTAATTAGCTCAG

PH0079.1_Hoxd3/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAACTCA-
ANGNTAATTANCNCAN

PH0020.1_Dlx1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGTTAACTCA-
ATTAATTANCTCAN

PH0174.1_Vax1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGTTAACTCA-
ACGTTAATTAACCCAG

PH0009.1_Bsx/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGTTAACTCA-
CAGGTAATTACCTCAG

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAACTCA--
NNNNCTGTTAACNNTNN