Information for motif15


Reverse Opposite:

p-value:1e-7
log p-value:-1.807e+01
Information Content per bp:1.868
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif67.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets440.5 +/- 445.5bp
Average Position of motif in Background528.2 +/- 429.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGAAGAGTCT----
NTNNNAGGAGTCTCNTN

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGAAGAGTCT--
----TWGTCTGV

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGAAGAGTCT
NGAAGC----

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGAAGAGTCT--
--VBSYGTCTGG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGAAGAGTCT--
----CTGTCTGG

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CGAAGAGTCT----
NNTTCTGGAANNTTCTAGAA

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGAAGAGTCT----
TAGAANVTTCTAGAA

MA0491.1_JUND/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGAAGAGTCT--
-NATGAGTCACN

MA0486.1_HSF1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGAAGAGTCT-----
AGAANNTTCTAGAAN

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CGAAGAGTCT-
-GATGAGTCAT