Information for motif21


Reverse Opposite:

p-value:1e-6
log p-value:-1.475e+01
Information Content per bp:1.826
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif426.2
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets407.4 +/- 373.7bp
Average Position of motif in Background475.7 +/- 461.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGGATTGC--
-AAGGATATNTN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAGGATTGC
NCTGGAATGC

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAAGGATTGC----
--GGGATTGCATNN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAGGATTGC
CCWGGAATGY

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGATTGC---
CTACTAGGATGTNNTN

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAGGATTGC
NTCAAGGTCA--

MA0505.1_Nr5a2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGATTGC
AAGTTCAAGGTCAGC

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAGGATTGC
BTCAAGGTCA--

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGATTGC
GCAGTGATTT-

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAGGATTGC
CNGTGATTTN