Information for motif24


Reverse Opposite:

p-value:1e-5
log p-value:-1.348e+01
Information Content per bp:1.548
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets394.6 +/- 386.0bp
Average Position of motif in Background533.5 +/- 589.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATACBGWCCK
-TACTNNNN-

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATACBGWCCK---
ACTATGCCAACCTACC

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATACBGWCCK
GGTTAGAGACCT

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATACBGWCCK-
NNACTTACCTN

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATACBGWCCK
ATACTTA---

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATACBGWCCK
GGTCCCGCCC-

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ATACBGWCCK-
CATACAATACGAAATAA

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATACBGWCCK--
NNNNGGTACCCCCCANN

MA0033.1_FOXL1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----ATACBGWCCK
TATACATA-------

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATACBGWCCK-
NNACTTGCCTT