Information for motif26


Reverse Opposite:

p-value:1e-5
log p-value:-1.213e+01
Information Content per bp:1.976
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets208.0 +/- 115.4bp
Average Position of motif in Background766.3 +/- 196.2bp
Strand Bias (log2 ratio + to - strand density)-3.5
Multiplicity (# of sites on avg that occur together)3.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTGTATATA----
ANNNGGATATATCCNNN

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTGTGTATATA--
TGTATATATATACC

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGTGTGTATATA
GAAAAGGTGTGAAAATT

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGTGTGTATATA--------
-----GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGTGTGTATATA--------
-----GTATAAAAGGCGGGG

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTGTGTATATA--
NNNNTTTGTTTACNNT

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGTATATA---
TACATGTGCACATAAAA

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGTATATA
GGATGTTTGTTT-

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GGTGTGTATATA
GTATTGGGTGGGTAATT-

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGTATATA---
CAGATGTGCACATACGT