Information for motif3


Reverse Opposite:

p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.699
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif69.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets356.1 +/- 351.7bp
Average Position of motif in Background386.5 +/- 428.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TAATCTGATAAG-----
TAAACTGATAAGAAGAT

Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATCTGATAAG
GTAATCDGATTA-

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAATCTGATAAG
TAATYNRATTAR

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TAATCTGATAAG--
----CAGATAAGGN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TAATCTGATAAG--
----NAGATAAGNN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TAATCTGATAAG-
---NBWGATAAGR

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAATCTGATAAG-----
TATAGAGATAAGAATTG

MA0036.2_GATA2/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TAATCTGATAAG-----
---NCAGATAAGAANNN

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAATCTGATAAG-
--NNGAGATAAGA

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAATCTGATAAG---
NNATNTGATANNNNN