Information for motif30


Reverse Opposite:

p-value:1e-4
log p-value:-9.779e+00
Information Content per bp:1.955
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets293.8 +/- 232.3bp
Average Position of motif in Background558.4 +/- 418.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGGTGTC------
TNNNNGGTGTCATNTNT

MA0493.1_Klf1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTGGGTGTC---
--TGGGTGTGGCN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTGGGTGTC--
--TGGGTGTGGC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTTGGGTGTC---
-NTGGGTGTGGCC

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGGTGTC----
NTNTGGGGGGTCNNNA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTTGGGTGTC-
---AGGTGTCA

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGGTGTC----
NNNATTGGGGGTNTCCT

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTGGGTGTC-----
GCGGAGGTGTCGCCTC

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTGGGTGTC--
GTGGCGTGACNG

MA0595.1_SREBF1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTGGGTGTC
GTGGGGTGAT