Information for motif31


Reverse Opposite:

p-value:1e-4
log p-value:-9.424e+00
Information Content per bp:1.976
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets253.2 +/- 199.2bp
Average Position of motif in Background579.0 +/- 481.8bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ACCATATATATA----
TCTTTATATATAAATA

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACCATATATATA----
ANNNGGATATATCCNNN

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACCATATATATA--
NNTATANATATACN

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACCATATATATA
----TATACATA

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACCATATATATA
-CCATATATGG-

PB0078.1_Srf_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACCATATATATA-
TNCCATATATGGNA

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACCATATATATA------
---GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACCATATATATA------
---GTATAAAAGGCGGGG

MA0109.1_Hltf/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACCATATATATA
AACCTTATAT---

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACCATATATATA-
-CCATATATGGNA