Information for motif37


Reverse Opposite:

p-value:1e-3
log p-value:-7.210e+00
Information Content per bp:1.958
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif22.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets344.1 +/- 199.2bp
Average Position of motif in Background557.5 +/- 539.6bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TAGGTGTACC----
TCTTTGGCGTACCCTAA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTGTACC
NNCAGGTGNN--

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAGGTGTACC---
GCGGAGGTGTCGCCTC

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TAGGTGTACC----
GCTGGGGGGTACCCCTT

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TAGGTGTACC---
---CTGTTCCTGG

MA0103.2_ZEB1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAGGTGTACC
CAGGTGAGG-

MA0009.1_T/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGGTGTACC
CTAGGTGTGAA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGGTGTACC
-AGGTGTCA-

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGGTGTACC---
CAAAGGCGTGGCCAG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGGTGTACC--
ATCCACAGGTGCGAAAA