Information for motif41


Reverse Opposite:

p-value:1e0
log p-value:-1.621e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets496.3 +/- 458.2bp
Average Position of motif in Background416.2 +/- 431.0bp
Strand Bias (log2 ratio + to - strand density)-5.1
Multiplicity (# of sites on avg that occur together)5.83
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGCTGAG
GGGAGGACNG---

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGAGGAGCTGAG
AGGGGGCGGGGCTG--

MA0048.1_NHLH1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGAGGAGCTGAG-
-NCGCAGCTGCGN

MA0522.1_Tcf3/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAGGAGCTGAG
-NTGCAGCTGTG

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGAGCTGAG---
NNNNAGCAGCTGCTGAN

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGAGGAGCTGAG
--CGGAGC----

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGAGCTGAG
GGGGGCGGGGC----

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGGAGCTGAG
AGAGGAAGTG--

MA0117.1_Mafb/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGAGGAGCTGAG--
------GCTGACGC

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGCTGAG
NGNGACAGCTGCN