Information for motif42


Reverse Opposite:

p-value:1e0
log p-value:-8.130e-01
Information Content per bp:1.864
Number of Target Sequences with motif870.0
Percentage of Target Sequences with motif12.40%
Number of Background Sequences with motif3784.8
Percentage of Background Sequences with motif12.35%
Average Position of motif in Targets435.0 +/- 400.6bp
Average Position of motif in Background457.8 +/- 417.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0099.2_JUN::FOS/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTWMTCAG
TGACTCA-

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTWMTCAG--
TGACTCAGCA

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTWMTCAG
TCATCAATCA-

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTWMTCAG---
ATGACTCAGCAD

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTWMTCAG---
AGGATGACTCAGCAC

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTWMTCAG-
ATGACTCATC

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTWMTCAG
RGCCATYAATCA-

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTWMTCAG------
ATGACTCAGCANWWT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTWMTCAG--
TGAGTCAGCA

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTWMTCAG--
GATGACTCAGCA