Information for motif43


Reverse Opposite:

p-value:1e0
log p-value:-5.292e-01
Information Content per bp:1.795
Number of Target Sequences with motif1133.0
Percentage of Target Sequences with motif16.15%
Number of Background Sequences with motif4981.7
Percentage of Background Sequences with motif16.25%
Average Position of motif in Targets418.1 +/- 389.9bp
Average Position of motif in Background452.6 +/- 424.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0015.1_Foxa2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTATTTTC-----
NNNTTTGTTTACTTTTN

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTATTTTC-----
TTACTTCCTNGTN

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTATTTTC----
NNTTTNTTTTNGNNN

PH0063.1_Hoxb8/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTATTTTC----
TTTATTAATTGCNNGN

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTTTC----
ANNCATTAATTGCTNGN

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTTC-----
TTTTTTTTCNNGTN

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TTATTTTC
NCNTTTGTTATTTNN

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTATTTTC
AATTATT---

MA0037.2_GATA3/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTATTTTC
TCTTATCT--

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTTC---
KCTATTTTTRGH