Information for motif5


Reverse Opposite:

p-value:1e-10
log p-value:-2.338e+01
Information Content per bp:1.947
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets366.8 +/- 297.3bp
Average Position of motif in Background611.7 +/- 308.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0017.1_Foxj3_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATGATAAAGAA----
AAAAAGTAAACAAACAC

MA0030.1_FOXF2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATGATAAAGAA-
CAAACGTAAACAAT

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATGATAAAGAA--
AAACAGACAAAGGAAT

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATGATAAAGAA----
TAAATGTAAACAAAGGT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AATGATAAAGAA
--AGATAASR--

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AATGATAAAGAA
ANAGATAAGAA-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AATGATAAAGAA
NBWGATAAGR--

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AATGATAAAGAA----
AAAATGTAAACAAACAG

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AATGATAAAGAA--
TAAACTGATAAGAAGAT

MA0036.2_GATA2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATGATAAAGAA--
NCAGATAAGAANNN