Information for motif7


Reverse Opposite:

p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.648
Number of Target Sequences with motif143.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif353.8
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets370.2 +/- 415.1bp
Average Position of motif in Background494.4 +/- 377.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0496.1_MAFK/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCATKCTGCTG------
---AAANTGCTGACTNAG

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCATKCTGCTG--
--CCCCCTGCTGTG

MA0095.2_YY1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCATKCTGCTG
GCNGCCATCTTG---

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCATKCTGCTG-----
--AAAWWTGCTGACWWD

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GCCATKCTGCTG-----
-------TGCTGACTCA

MA0495.1_MAFF/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCATKCTGCTG-------
-NAAAANTGCTGACTCAGC

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCCATKCTGCTG--
------CAGCTGNT

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GCCATKCTGCTG-
GGAGCTGTCCATGGTGCTGA

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCATKCTGCTG-------
--AAATTTGCTGACTTAGA

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCATKCTGCTG-----
--TNTCCTGCTGTGNNG