Information for motif1


Reverse Opposite:

p-value:1e-30
log p-value:-6.935e+01
Information Content per bp:1.793
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets433.3 +/- 432.1bp
Average Position of motif in Background712.3 +/- 297.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GATGCTCAAATC---
-ATGATCGAATCAAA

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GATGCTCAAATC
GGTGYTGACAGS

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GATGCTCAAATC
CGAACAGTGCTCACTAT

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GATGCTCAAATC-
GGGTGTGCCCAAAAGG

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GATGCTCAAATC
AAAWWTGCTGACWWD

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GATGCTCAAATC
--NGCTN-----

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GATGCTCAAATC-
AAANTGCTGACTNAG

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GATGCTCAAATC--
AAATTTGCTGACTTAGA

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GATGCTCAAATC
TAAAAATGCTGACTT-

MA0117.1_Mafb/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GATGCTCAAATC
---GCTGACGC-