Information for motif10


Reverse Opposite:

p-value:1e-12
log p-value:-2.823e+01
Information Content per bp:1.708
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets319.2 +/- 369.8bp
Average Position of motif in Background622.9 +/- 320.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTCCCTACACCA
AGGTCTCTAACC--

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTCCCTACACCA----
NNGGCGACACCTCNNN

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GTCCCTACACCA-
-----TACTNNNN

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GTCCCTACACCA
GGCCATAAATCA

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GTCCCTACACCA-
---ATTGCATCAT

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCTACACCA
NNGCACCTTTCTCC-

MA0073.1_RREB1/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GTCCCTACACCA----------
--CCCCAAACCACCCCCCCCCA

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GTCCCTACACCA-
ATGTCACAACAACAC

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:GTCCCTACACCA-
---ATCACCCCAT

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GTCCCTACACCA--
CTATCCCCGCCCTATT