Information for motif11


Reverse Opposite:

p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.661
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets289.3 +/- 374.1bp
Average Position of motif in Background431.7 +/- 260.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CATTGTAGTGGA-
-------GTGGAT

MA0122.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CATTGTAGTGGA
---TTAAGTGGA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CATTGTAGTGGA---
NNNANTGCAGTGCNNTT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATTGTAGTGGA
--CTYRAGTGSY

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATTGTAGTGGA---
AAATTCAAGTGGNTTN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATTGTAGTGGA-
---TTGAGTGSTT

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CATTGTAGTGGA
TAATTCAATGAAGTG--

MA0442.1_SOX10/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATTGTAGTGGA
CTTTGT------

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATTGTAGTGGA---
NNCTTTGTTTTGNTNNN

OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATTGTAGTGGA---
CATTGTTATGCAAAT