| p-value: | 1e-10 |
| log p-value: | -2.304e+01 |
| Information Content per bp: | 1.721 |
| Number of Target Sequences with motif | 51.0 |
| Percentage of Target Sequences with motif | 0.73% |
| Number of Background Sequences with motif | 21.8 |
| Percentage of Background Sequences with motif | 0.26% |
| Average Position of motif in Targets | 355.2 +/- 333.3bp |
| Average Position of motif in Background | 776.7 +/- 552.4bp |
| Strand Bias (log2 ratio + to - strand density) | -0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0105.3_NFKB1/Jaspar
| Match Rank: | 1 |
| Score: | 0.70
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | TGGGCAATGCCC
-GGGAAATTCCC |
|
|
|
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
| Match Rank: | 2 |
| Score: | 0.69
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | TGGGCAATGCCC-
-GGGAAATCCCCN |
|
|
|
PB0133.1_Hic1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.68
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----TGGGCAATGCCC
NNNNTTGGGCACNNCN- |
|
|
|
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer
| Match Rank: | 4 |
| Score: | 0.68
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TGGGCAATGCCC
GGGGGAATCCCC |
|
|
|
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer
| Match Rank: | 5 |
| Score: | 0.67
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | TGGGCAATGCCC
--GGAAATTCCC |
|
|
|
MA0107.1_RELA/Jaspar
| Match Rank: | 6 |
| Score: | 0.67
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | TGGGCAATGCCC
--GGAAATTCCC |
|
|
|
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer
| Match Rank: | 7 |
| Score: | 0.66
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TGGGCAATGCCC-
NAGGTCANTGACCT |
|
|
|
MF0003.1_REL_class/Jaspar
| Match Rank: | 8 |
| Score: | 0.66
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | TGGGCAATGCCC
--GGAAATCCCC |
|
|
|
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
| Match Rank: | 9 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TGGGCAATGCCC
CSTGGGAAAD---- |
|
|
|
MA0101.1_REL/Jaspar
| Match Rank: | 10 |
| Score: | 0.62
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | TGGGCAATGCCC
--GGAAANCCCC |
|
|
|
