Information for motif20


Reverse Opposite:

p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.874
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets302.9 +/- 262.4bp
Average Position of motif in Background183.0 +/- 108.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AACTCTGACTAA----
-ACCGTGACTAATTNN

MA0099.2_JUN::FOS/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AACTCTGACTAA
-----TGACTCA

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AACTCTGACTAA--
----ATGACTCATC

MA0476.1_FOS/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AACTCTGACTAA--
---TGTGACTCATT

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AACTCTGACTAA-
---DATGASTCAT

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AACTCTGACTAA---
---DATGASTCATHN

MA0491.1_JUND/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AACTCTGACTAA--
---GGTGACTCATC

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AACTCTGACTAA---
---NATGACTCATNN

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACTCTGACTAA-
AGGAGATGACTCAT

MA0477.1_FOSL1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AACTCTGACTAA--
---GGTGACTCATG