Information for motif21


Reverse Opposite:

p-value:1e-9
log p-value:-2.109e+01
Information Content per bp:1.700
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets396.7 +/- 324.1bp
Average Position of motif in Background704.5 +/- 442.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0111.1_Spz1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGGGATACACC
-AGGGTAACAGC

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CAGGGATACACC----
ACTGACCCTTGGTTACCACAAAG

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGGGATACACC
TACCCTAGTTACCGA

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGGGATACACC-----
-NNGGCGACACCTCNNN

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGGGATACACC--
--AGGAAACAGCTG

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGGGATACACC--
CTACTTGGATACGGAAT

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGGGATACACC-
-GGGGATTCCCCC

MA0157.1_FOXO3/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGGGATACACC
--TGTAAACA--

MA0105.3_NFKB1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGGGATACACC-
--GGGAAATTCCC

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGATACACC---
ANANGTGATACCCCATT