Information for motif26


Reverse Opposite:

p-value:1e-7
log p-value:-1.813e+01
Information Content per bp:1.982
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets370.8 +/- 367.8bp
Average Position of motif in Background619.3 +/- 449.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTCAAATAG
TAATCAATTA-

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTCAAATAG
CCAAAAATAG

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAAATAG------
WNAGTCADAVTGAAACTN

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGTCAAATAG
GGCAAAAGTCCAATAA

MA0153.1_HNF1B/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTCAAATAG---
-GTTAAATATTAA

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGTCAAATAG----
AGCTGTTAACTAGCCGT

PH0154.1_Prrx1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTCAAATAG----
ANNAGTTAATTAGTTAN

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTCAAATAG--
AAACAAACANNC

MA0099.2_JUN::FOS/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAAATAG
TGAGTCA-----

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGTCAAATAG
ATATGCAAAT--