Information for motif28


Reverse Opposite:

p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.530
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets455.2 +/- 452.0bp
Average Position of motif in Background858.8 +/- 589.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TATTCACTGC
AAATCACTGC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TATTCACTGC------
AATCGCACTGCATTCCG

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TATTCACTGC------
CAATCACTGGCAGAAT

MA0483.1_Gfi1b/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TATTCACTGC-
AAATCACAGCA

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TATTCACTGC----
TTTATTAATTGCNNGN

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TATTCACTGC--
AATCAATTCAATAATT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATTCACTGC--
GTTTCACTTCCG

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TATTCACTGC----
TAATTCAATGAAGTG

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TATTCACTGC
NNNNTGAATTCANNNC

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TATTCACTGC---
ACATTCATGACACG