Information for motif30


Reverse Opposite:

p-value:1e-6
log p-value:-1.452e+01
Information Content per bp:1.961
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets483.2 +/- 452.4bp
Average Position of motif in Background717.4 +/- 354.6bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)2.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTCAGCTCCTCC-
---CNGTCCTCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCAGCTCCTCC----
--NAGCCCCGCCCCCN

MA0048.1_NHLH1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCAGCTCCTCC
GCGCAGCTGCGT-

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCAGCTCCTCC
--CACTTCCTCT

MA0522.1_Tcf3/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCAGCTCCTCC
CACAGCTGCAG-

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCTCCTCC--
CTCAGCAGCTGCTACTG

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCAGCTCCTCC---
----GCCCCGCCCCC

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCAGCTCCTCC
----GCTCCG--

MA0080.3_Spi1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCAGCTCCTCC----
-NCACTTCCTCTTTTN

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCAGCTCCTCC-
TGCAGCTGTCCCT