Information for motif31


Reverse Opposite:

p-value:1e-6
log p-value:-1.440e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets398.9 +/- 398.0bp
Average Position of motif in Background726.3 +/- 424.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCAAACTTTC
-CAAGCTT--

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAACTTTC-----
NTGACTCANTTTTTCCANTN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCAAACTTTC------
----ACTTTCACTTTC

MA0100.2_Myb/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAAACTTTC-
-CCAACTGCCA

MA0508.1_PRDM1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCAAACTTTC-------
--TCACTTTCACTTTCN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCAAACTTTC
KTTCACACCT--

CHR/Cell-Cycle-Exp/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCAAACTTTC
CGGTTTCAAA-----

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCAAACTTTC------
----ACTTTCGTTTCT

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAACTTTC--
NNTTTTCACACCTTNNN

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCAAACTTTC----
CGACCAACTGCCATGC