Information for motif36


Reverse Opposite:

p-value:1e-3
log p-value:-8.304e+00
Information Content per bp:1.909
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets348.3 +/- 350.6bp
Average Position of motif in Background1168.6 +/- 355.3bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGGGGT--
NTGCCCANNGGTNA

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGGGGT-
NGTCCCNNGGGA

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCCCGGGGT
GTCACGTGGT

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCCCGGGGT-------
CTCCAGGGGTCAATTGA

MA0155.1_INSM1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGGGGT-
TGTCAGGGGGCG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGGGGT
NYTTCCCGCC--

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGGGGT
CTGTTCCTGG--

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGGGGT
GGTCCCGCCC-

MA0067.1_Pax2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGGGGT
AGTCACGC---

MA0093.2_USF1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGGGGT
GGTCACGTGGC