| p-value: | 1e-17 |
| log p-value: | -4.112e+01 |
| Information Content per bp: | 1.862 |
| Number of Target Sequences with motif | 23.0 |
| Percentage of Target Sequences with motif | 0.33% |
| Number of Background Sequences with motif | 2.5 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 369.8 +/- 356.9bp |
| Average Position of motif in Background | 338.4 +/- 341.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.04 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0507.1_POU2F2/Jaspar
| Match Rank: | 1 |
| Score: | 0.63
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATATGCATCACC
TTCATTTGCATAT-- |
|
|
|
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 2 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ATATGCATCACC
ATTTGCATAA-- |
|
|
|
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATATGCATCACC
AAGATATCCTT---- |
|
|
|
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 4 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATATGCATCACC--
AAAATATGCATAATAAA |
|
|
|
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATATGCATCACC
NAGATWNBNATCTNN |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -ATATGCATCACC
GYCATCMATCAT- |
|
|
|
MA0142.1_Pou5f1::Sox2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | ATATGCATCACC---
ATTTGCATAACAAAG |
|
|
|
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ATATGCATCACC---
ATTTGCATAACAATG |
|
|
|
PH0144.1_Pou2f2/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----ATATGCATCACC
TNTAATTTGCATANNN |
|
|
|
PH0145.1_Pou2f3/Jaspar
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----ATATGCATCACC
TNTAATTTGCATACNA |
|
|
|
