Information for motif6


Reverse Opposite:

p-value:1e-17
log p-value:-3.950e+01
Information Content per bp:1.832
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets453.7 +/- 393.4bp
Average Position of motif in Background531.1 +/- 311.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACGGTCCCCA
----TCCCCA

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTCCCCA-
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTCCCCA-
NNANTAACGGTTNNNAN

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTCCCCA-
TCTCAAAGGTCACCTG

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACGGTCCCCA-----
NTNNCGTATCCAAGTNN

MA0592.1_ESRRA/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACGGTCCCCA
CCAAGGTCACA-

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACGGTCCCCA
TCAAGGTCAN--

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTCCCCA-
TCTCAAAGGTCACGAG

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACGGTCCCCA--
SCTGTCARCACC

MA0141.2_Esrrb/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTCCCCA
AGCTCAAGGTCA---