Information for motif7


Reverse Opposite:

p-value:1e-16
log p-value:-3.715e+01
Information Content per bp:1.870
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets357.8 +/- 402.7bp
Average Position of motif in Background829.3 +/- 167.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR/Cell-Cycle-Exp/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GAGTTTCAATTG
CGGTTTCAAA--

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTTCAATTG--
TNAGTTTCGATTTTN

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGTTTCAATTG-
-AGTTTCAGTTTC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGTTTCAATTG
-ATTTTCCATT-

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGTTTCAATTG--
TCAGTTTCATTTTCC

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGTTTCAATTG-----
NANTTTCAAGTGGTTAN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGTTTCAATTG
TGGTTTCAGT--

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTTCAATTG--
NTGGTTTCGGTTNNN

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGTTTCAATTG-
-ACTTTCACTTTC

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGTTTCAATTG--
CAGTTTCGNTTCTN