Information for motif8


Reverse Opposite:

p-value:1e-13
log p-value:-3.003e+01
Information Content per bp:1.856
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets329.5 +/- 274.9bp
Average Position of motif in Background324.9 +/- 318.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCTTGAATAGAT-
NNNTATTGAATTGNNN

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCTTGAATAGAT
NNTNTCATGAATGT--

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTTGAATAGAT---
ACTATGAATGAATGAT

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTTGAATAGAT--
NNNNGTTGATTGGGTCG

PH0043.1_Hmx3/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGAATAGAT---
ATTNNTTAATTGCTTGT

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTGAATAGAT---
NNATNAATTGTTTNN

MA0468.1_DUX4/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCTTGAATAGAT--
---TGATTAAATTA

PB0197.1_Zfp105_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TCTTGAATAGAT
NAAANTTATTGAANCAN-

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGAATAGAT---
ANNCATTAATTGCTNGN

PH0042.1_Hmx2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGAATAGAT---
ATTCNTTAATTGCTTGT