Information for motif9


Reverse Opposite:

p-value:1e-12
log p-value:-2.903e+01
Information Content per bp:1.656
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets452.4 +/- 373.4bp
Average Position of motif in Background765.0 +/- 347.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------ATATTACCCWAC
NNTNNCAATATTAG-----

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATATTACCCWAC
--ATTGCGCAAC

MA0466.1_CEBPB/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATATTACCCWAC
-TATTGCACAAT

MA0102.3_CEBPA/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATATTACCCWAC-
--ATTGCACAATA

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATATTACCCWAC
--ATTGCATAA-

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATATTACCCWAC
GGAAATTCCC----

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATATTACCCWAC
GKVTCADRTTWC-----

MA0081.1_SPIB/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ATATTACCCWAC
---TTCCTCT--

MA0025.1_NFIL3/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATATTACCCWAC
ANGTTACATAA-

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATATTACCCWAC
NAATTTTATTACCTNN-