Information for motif10


Reverse Opposite:

p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.711
Number of Target Sequences with motif644.0
Percentage of Target Sequences with motif14.37%
Number of Background Sequences with motif2838.7
Percentage of Background Sequences with motif11.34%
Average Position of motif in Targets464.3 +/- 430.0bp
Average Position of motif in Background476.7 +/- 453.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTTGSCCAGGCT---
-ATGCCCGGGCATGT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTTGSCCAGGCT
HTTTCCCASG--

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTTGSCCAGGCT-
NGTTGCCATGGCAA

MA0509.1_Rfx1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTTGSCCAGGCT--
GTTGCCATGGNAAC

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTTGSCCAGGCT-
GGGTGTGCCCAAAAGG

MA0600.1_RFX2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGSCCAGGCT--
NNNCNGTTGCCATGGNAAC

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTTGSCCAGGCT-
-----BCAGACWA

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTTGSCCAGGCT-
GGTTGCCATGGCAA

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GTTGSCCAGGCT-
--------NGCTN

MA0506.1_NRF1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTTGSCCAGGCT-
--TGCGCAGGCGC