Information for motif11


Reverse Opposite:

p-value:1e-9
log p-value:-2.153e+01
Information Content per bp:1.605
Number of Target Sequences with motif649.0
Percentage of Target Sequences with motif14.49%
Number of Background Sequences with motif2868.9
Percentage of Background Sequences with motif11.46%
Average Position of motif in Targets454.5 +/- 447.9bp
Average Position of motif in Background466.4 +/- 452.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TRTARTCCCA
AGATGCAATCCC-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TRTARTCCCA
NNHTGTGGTTWN-

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TRTARTCCCA
NCGTATTATAATCNTA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TRTARTCCCA
CTGTGGTTTN-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TRTARTCCCA
GCTGTGGTTT--

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TRTARTCCCA--
NNNANTGCAGTGCNNTT

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TRTARTCCCA
NANTATTATAATTNNN

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TRTARTCCCA
NNNTTTNTAATACNG

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TRTARTCCCA
TTGAATGAAATTCGA

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TRTARTCCCA
GTCTGTGGTTT--