Information for motif13


Reverse Opposite:

p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.596
Number of Target Sequences with motif545.0
Percentage of Target Sequences with motif12.17%
Number of Background Sequences with motif2383.3
Percentage of Background Sequences with motif9.52%
Average Position of motif in Targets617.6 +/- 503.4bp
Average Position of motif in Background612.6 +/- 547.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGCTGAGGCGG---
-GGCGGGGGCGGGGG

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGCTGAGGCGG---
GGGNGGGGGCGGGGC

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGCTGAGGCGG
--GCTGACGC--

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGAGGCGG-
ATTGCCTGAGGCAAT

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTGAGGCGG-
ANTGCGGGGGCGGN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCTGAGGCGG----
NNTNAGGGGCGGNNNN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCTGAGGCGG
TGGGTGTGGC--

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGCTGAGGCGG
TGGGTGGGGC--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGCTGAGGCGG
DGGGYGKGGC--

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGCTGAGGCGG---
----GGGGGCGGGGC