Information for motif14


Reverse Opposite:

p-value:1e-7
log p-value:-1.776e+01
Information Content per bp:1.664
Number of Target Sequences with motif252.0
Percentage of Target Sequences with motif5.62%
Number of Background Sequences with motif983.0
Percentage of Background Sequences with motif3.93%
Average Position of motif in Targets500.2 +/- 539.3bp
Average Position of motif in Background510.2 +/- 459.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0442.1_SOX10/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TACAAGGCGA
-ACAAAG---

MA0505.1_Nr5a2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TACAAGGCGA--
AAGTTCAAGGTCAGC

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TACAAGGCGA
NTCAAGGTCA

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TACAAGGCGA
BTCAAGGTCA

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TACAAGGCGA---
NNTNNACAATGGGANNN

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TACAAGGCGA
RNAACAATGG--

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TACAAGGCGA
GNCTATAAAAGG---

MA0515.1_Sox6/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TACAAGGCGA
AAAACAATGG--

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TACAAGGCGA
RACAAWGG--

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TACAAGGCGA-----
TATTCAAGGTCATGCGA