Information for motif19


Reverse Opposite:

p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets257.9 +/- 215.8bp
Average Position of motif in Background346.1 +/- 412.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GCGCCAATCTAT
CCTTCGGCGCCAAAAGG-

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GCGCCAATCTAT
AGCTCGGCGCCAAAAGC-

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGCCAATCTAT
-TGCCAA-----

MA0502.1_NFYB/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCGCCAATCTAT
AAATGGACCAATCAG-

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGCCAATCTAT
-AGCCAATCGG-

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCGCCAATCTAT----
CGACCCAATCAACGGTG

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCGCCAATCTAT
TACGCCCCGCCACTCTG-

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCGCCAATCTAT-
---CAAATCACTG

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCAATCTAT
NNGCACCTTTCTCC

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCGCCAATCTAT
AGCGCGCC-------