Information for motif21


Reverse Opposite:

p-value:1e-5
log p-value:-1.362e+01
Information Content per bp:1.743
Number of Target Sequences with motif881.0
Percentage of Target Sequences with motif19.67%
Number of Background Sequences with motif4245.7
Percentage of Background Sequences with motif16.96%
Average Position of motif in Targets463.6 +/- 442.2bp
Average Position of motif in Background439.3 +/- 434.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTTTTWTTTTTT---
NTNTTGTTGTTTGTN

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTTTWTTTTTT-----
NNNNTTTTTTTTTNAAC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TTTTTWTTTTTT------
----TTTTTTTTCNNGTN

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTWTTTTTT
NNTTTTTCTTATNT

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTWTTTTTT----
GNATTTTTTTTTTGANC

MA0042.1_FOXI1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTTTTWTTTTTT
GGATGTTTGTTT---

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTTTTWTTTTTT-----
--NNTTTNTTTTNGNNN

MA0041.1_Foxd3/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTTTTWTTTTTT-
-GAATGTTTGTTT

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTWTTTTTT
NCNTTTGTTATTTNN-

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTTTWTTTTTT
TGTTTATTT---