Information for motif22


Reverse Opposite:

p-value:1e-5
log p-value:-1.335e+01
Information Content per bp:1.791
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets583.2 +/- 385.5bp
Average Position of motif in Background480.0 +/- 197.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)2.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TATGATGMTGCT-----
--AGATGCTRCTRCCHT

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TATGATGMTGCT
CATGAC------

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TATGATGMTGCT
NNCTNAATTATGANN--

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TATGATGMTGCT-
--------NGCTN

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TATGATGMTGCT-
---NATGTTGCAA

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TATGATGMTGCT--
----MTGATGCAAT

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TATGATGMTGCT----
NNNNATGCGGGTNNNN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TATGATGMTGCT--
----ATGATGCAAT

MA0488.1_JUN/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TATGATGMTGCT--
-AAGATGATGTCAT

Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------TATGATGMTGCT--
ACTYKNATTCGTGNTACTTC