Information for motif27


Reverse Opposite:

p-value:1e-5
log p-value:-1.185e+01
Information Content per bp:1.596
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets446.7 +/- 354.6bp
Average Position of motif in Background507.8 +/- 263.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTGGTTCGTTG
GTTTGTT-----

MA0133.1_BRCA1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTTCGTTG
GTGTTGN-------

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTTGGTTCGTTG-
NNNNGTTGATTGGGTCG

MA0073.1_RREB1/Jaspar

Match Rank:4
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------GTTGGTTCGTTG
NGGGGGGGGGTGGTTTGGGG

MA0502.1_NFYB/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTTCGTTG
CTGATTGGTCNATTT

MA0119.1_TLX1::NFIC/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTTGGTTCGTTG---
-TTGGCATGGTGCCA

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGGTTCGTTG
CACGGCAGTTGGTNN----

MA0041.1_Foxd3/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTTGGTTCGTTG
GAATGTTTGTTT----

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTTGGTTCGTTG
GGATGTTTGTTT-

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTTCGTTG
CAGCTGTTTCCT--