Information for motif28


Reverse Opposite:

p-value:1e-5
log p-value:-1.181e+01
Information Content per bp:1.860
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif106.8
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets700.6 +/- 583.0bp
Average Position of motif in Background584.9 +/- 474.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGGGGGCGGAGT
-GGGGGCGGGGC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGGGGGCGGAGT--
AGGGGGCGGGGCTG

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGGGGGCGGAGT
GGCGGGGGCGGGGG

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGGGGGCGGAGT--
NNTNNGGGGCGGNGNGN

PB0100.1_Zfp740_1/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGGCGGAGT
NANNTGGGGGGGGNGN

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGGGGGCGGAGT-
-GGGGGCGGGGCC

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGGCGGAGT---
NNAGGGGCGGGGTNNA

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGGCGGAGT-
NNNAAGGGGGCGGGNNN

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGGCGGAGT
ANTGCGGGGGCGGN--

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGGGGGCGGAGT-
NNTNAGGGGCGGNNNN