Information for motif30


Reverse Opposite:

p-value:1e-3
log p-value:-9.196e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets158.7 +/- 159.2bp
Average Position of motif in Background434.3 +/- 346.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTATGGCCTA-
---AGGCCTAG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTATGGCCTA-
---AGGCCTNG

MA0072.1_RORA_2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTATGGCCTA------
--TTGACCTANTTATN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTATGGCCTA
GGTCTGGCAT-

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTATGGCCTA
---TGACCT-

MA0071.1_RORA_1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTATGGCCTA---
---TGACCTTGAT

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTATGGCCTA--
TTNGGGTACGCCNNANN

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTATGGCCTA----
GGGTGTGCCCAAAAGG

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTATGGCCTA-
NNTNNTGTCTGGNNTNG

MA0465.1_CDX2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTATGGCCTA
TTTTATGGCTN-