Information for motif31


Reverse Opposite:

p-value:1e-3
log p-value:-8.950e+00
Information Content per bp:1.788
Number of Target Sequences with motif313.0
Percentage of Target Sequences with motif6.99%
Number of Background Sequences with motif1421.0
Percentage of Background Sequences with motif5.68%
Average Position of motif in Targets799.0 +/- 517.5bp
Average Position of motif in Background827.8 +/- 585.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGTCG----
TNAACGACGTCGNCCA

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGGCGTCG--------
-TCCGTCGCTTAAAAG

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGCGTCG-
-GGCGCGCT

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGTCG----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGTCG----
NNNNTTGGCGCCGANNN

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGTCG--
ANTGCGGGGGCGGN

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGGCGTCG----
GCGGAGGTGTCGCCTC

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGCGTCG----
GGCGGGGGCGGGGG

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGTCG-----
NNNAAGGGGGCGGGNNN

MA0018.2_CREB1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGCGTCG
TGACGTCA