Information for motif34


Reverse Opposite:

p-value:1e-2
log p-value:-4.830e+00
Information Content per bp:1.530
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif288.2
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets430.5 +/- 456.0bp
Average Position of motif in Background407.9 +/- 391.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCTCCTGC
CNGTCCTCCC--

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATCCTCCTGC----
--CCCCCTGCTGTG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATCCTCCTGC-
-NNCACCTGNN

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTCCTGC----
NNTCCTGCTGTGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTCCTGC----
TNTCCTGCTGTGNNG

MA0024.2_E2F1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCCTCCTGC---
--CCTCCCGCCCN

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCCTCCTGC--
-NCTTCCCGCCC

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTCCTGC----
TCNCCTGCTGNGNNN

MA0470.1_E2F4/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCCTCCTGC--
-NNTTCCCGCCC

MA0467.1_Crx/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATCCTCCTGC
CTAATCCTCTT--