Information for motif8


Reverse Opposite:

p-value:1e-9
log p-value:-2.256e+01
Information Content per bp:1.816
Number of Target Sequences with motif367.0
Percentage of Target Sequences with motif8.19%
Number of Background Sequences with motif1465.3
Percentage of Background Sequences with motif5.85%
Average Position of motif in Targets466.7 +/- 478.5bp
Average Position of motif in Background471.1 +/- 465.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTTTGA--
NTNNNAGGAGTCTCNTN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGAGTTTGA
NCTGGAATGC--

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGTTTGA
AAGGAAGTA--

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGGAGTTTGA--
NNATTGGACTTTNGNN

MA0114.2_HNF4A/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGAGTTTGA----
CTGGACTTTGGACTC

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTTTGA-
CTACTAGGATGTNNTN

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGTTTGA
CNGAGGAATGTG-

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGAGTTTGA----
TGCGGAGTGGGACTGG

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGAGTTTGA------
TGGACTTTGNNCTNTG

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGAGTTTGA
CAGGAAAT---