Information for motif9


Reverse Opposite:

p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.648
Number of Target Sequences with motif520.0
Percentage of Target Sequences with motif11.61%
Number of Background Sequences with motif2219.9
Percentage of Background Sequences with motif8.87%
Average Position of motif in Targets474.8 +/- 463.8bp
Average Position of motif in Background463.5 +/- 453.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACTACAACCT--
ACCACATCCTGT

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACTACAACCT---
NNGATCTAGAACCTNNN

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTACAACCT------
NNNNCAACCTTCGNGA

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTACAACCT--
CAAACAACAACACCT

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTACAACCT-----
GATAACATCCTAGTAG

MA0133.1_BRCA1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACTACAACCT
---ACAACAC

MA0027.1_En1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACTACAACCT
GANCACTACTT

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACTACAACCT
GGCCACACCCA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTACAACCT
NWAACCACADNN-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTACAACCT-
GGCCACACCCAN