Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 4475)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 25101)	% of Background Sequences with Motif
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-2	-5.025e+00	1.0000	98.0	2.19%	421.7	1.68%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-4.177e+00	1.0000	389.0	8.68%	1951.3	7.80%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-3.716e+00	1.0000	218.0	4.87%	1064.6	4.25%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-1	-2.816e+00	1.0000	147.0	3.28%	720.4	2.88%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e-1	-2.744e+00	1.0000	87.0	1.94%	410.4	1.64%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e-1	-2.705e+00	1.0000	58.0	1.29%	263.3	1.05%
NRF1/Promoter/Homer	STGCGCATGCGC	1e-1	-2.587e+00	1.0000	164.0	3.66%	817.8	3.27%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-2.464e+00	1.0000	453.0	10.11%	2377.8	9.50%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-1	-2.447e+00	1.0000	469.0	10.47%	2465.1	9.85%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-2.224e+00	1.0000	280.0	6.25%	1453.3	5.81%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-1.949e+00	1.0000	126.0	2.81%	638.3	2.55%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-1.936e+00	1.0000	109.0	2.43%	548.6	2.19%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.617e+00	1.0000	376.0	8.39%	2012.9	8.04%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.598e+00	1.0000	825.0	18.42%	4488.0	17.93%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.562e+00	1.0000	820.0	18.30%	4463.3	17.83%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.452e+00	1.0000	247.0	5.51%	1317.8	5.27%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.444e+00	1.0000	110.0	2.46%	572.4	2.29%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.405e+00	1.0000	75.0	1.67%	385.8	1.54%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.361e+00	1.0000	205.0	4.58%	1093.7	4.37%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.343e+00	1.0000	294.0	6.56%	1582.8	6.32%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.342e+00	1.0000	425.0	9.49%	2303.6	9.20%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-1.320e+00	1.0000	11.0	0.25%	49.0	0.20%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-1.316e+00	1.0000	64.0	1.43%	329.2	1.32%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.285e+00	1.0000	1089.0	24.31%	5987.0	23.92%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.224e+00	1.0000	545.0	12.17%	2977.3	11.90%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.216e+00	1.0000	105.0	2.34%	556.0	2.22%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.202e+00	1.0000	46.0	1.03%	236.2	0.94%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.197e+00	1.0000	159.0	3.55%	851.1	3.40%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.195e+00	1.0000	398.0	8.88%	2168.0	8.66%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.186e+00	1.0000	1227.0	27.39%	6768.9	27.04%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.117e+00	1.0000	1246.0	27.81%	6884.6	27.51%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.115e+00	1.0000	953.0	21.27%	5254.3	20.99%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.113e+00	1.0000	31.0	0.69%	158.3	0.63%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.111e+00	1.0000	130.0	2.90%	698.0	2.79%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-1.104e+00	1.0000	15.0	0.33%	73.6	0.29%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.097e+00	1.0000	18.0	0.40%	89.4	0.36%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.090e+00	1.0000	188.0	4.20%	1017.4	4.06%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.062e+00	1.0000	271.0	6.05%	1477.3	5.90%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.057e+00	1.0000	27.0	0.60%	138.1	0.55%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.026e+00	1.0000	100.0	2.23%	537.4	2.15%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.026e+00	1.0000	100.0	2.23%	537.4	2.15%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.008e+00	1.0000	270.0	6.03%	1476.4	5.90%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-9.710e-01	1.0000	1244.0	27.77%	6896.7	27.55%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-9.599e-01	1.0000	227.0	5.07%	1242.2	4.96%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-9.124e-01	1.0000	1152.0	25.71%	6393.8	25.55%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-9.106e-01	1.0000	289.0	6.45%	1590.1	6.35%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-8.367e-01	1.0000	163.0	3.64%	897.6	3.59%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-8.088e-01	1.0000	250.0	5.58%	1383.4	5.53%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-7.782e-01	1.0000	416.0	9.29%	2311.6	9.24%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-7.745e-01	1.0000	76.0	1.70%	418.8	1.67%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-7.625e-01	1.0000	672.0	15.00%	3742.0	14.95%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-7.562e-01	1.0000	99.0	2.21%	547.4	2.19%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-7.170e-01	1.0000	136.0	3.04%	756.7	3.02%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-7.083e-01	1.0000	1098.0	24.51%	6129.4	24.49%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-6.579e-01	1.0000	128.0	2.86%	716.8	2.86%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-6.574e-01	1.0000	227.0	5.07%	1270.0	5.07%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-5.904e-01	1.0000	205.0	4.58%	1154.4	4.61%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-5.833e-01	1.0000	1677.0	37.43%	9393.2	37.53%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-5.817e-01	1.0000	2480.0	55.36%	13880.4	55.46%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-5.690e-01	1.0000	245.0	5.47%	1382.0	5.52%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-5.480e-01	1.0000	366.0	8.17%	2063.1	8.24%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-5.435e-01	1.0000	653.0	14.58%	3673.3	14.68%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-4.881e-01	1.0000	623.0	13.91%	3516.1	14.05%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-4.839e-01	1.0000	136.0	3.04%	777.9	3.11%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-4.687e-01	1.0000	129.0	2.88%	739.2	2.95%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-4.670e-01	1.0000	238.0	5.31%	1355.8	5.42%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-4.624e-01	1.0000	1404.0	31.34%	7899.4	31.56%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-4.369e-01	1.0000	844.0	18.84%	4768.3	19.05%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-4.279e-01	1.0000	214.0	4.78%	1225.5	4.90%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-3.978e-01	1.0000	735.0	16.41%	4166.8	16.65%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-3.964e-01	1.0000	126.0	2.81%	730.7	2.92%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-3.952e-01	1.0000	1262.0	28.17%	7125.0	28.47%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-3.948e-01	1.0000	2189.0	48.86%	12311.5	49.19%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-3.873e-01	1.0000	644.0	14.37%	3657.3	14.61%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-3.866e-01	1.0000	427.0	9.53%	2435.7	9.73%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-3.831e-01	1.0000	243.0	5.42%	1396.2	5.58%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-3.616e-01	1.0000	35.0	0.78%	211.8	0.85%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-3.611e-01	1.0000	68.0	1.52%	402.9	1.61%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-3.573e-01	1.0000	23.0	0.51%	141.9	0.57%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-3.406e-01	1.0000	456.0	10.18%	2609.6	10.43%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-3.363e-01	1.0000	390.0	8.71%	2237.3	8.94%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-3.262e-01	1.0000	107.0	2.39%	630.5	2.52%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-3.211e-01	1.0000	1494.0	33.35%	8450.3	33.76%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-3.157e-01	1.0000	934.0	20.85%	5309.1	21.21%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-2.967e-01	1.0000	394.0	8.79%	2269.3	9.07%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-2.896e-01	1.0000	157.0	3.50%	922.0	3.68%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-2.863e-01	1.0000	91.0	2.03%	543.5	2.17%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.801e-01	1.0000	487.0	10.87%	2801.0	11.19%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.777e-01	1.0000	130.0	2.90%	769.4	3.07%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-2.769e-01	1.0000	18.0	0.40%	116.1	0.46%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-2.762e-01	1.0000	425.0	9.49%	2450.9	9.79%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-2.730e-01	1.0000	75.0	1.67%	452.7	1.81%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-2.699e-01	1.0000	472.0	10.54%	2718.9	10.86%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-2.697e-01	1.0000	643.0	14.35%	3685.7	14.73%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.581e-01	1.0000	1221.0	27.25%	6944.6	27.75%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-2.452e-01	1.0000	1037.0	23.15%	5915.6	23.63%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-2.377e-01	1.0000	1401.0	31.27%	7964.2	31.82%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-2.354e-01	1.0000	1702.0	37.99%	9653.1	38.57%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.239e-01	1.0000	1124.0	25.09%	6414.2	25.63%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-2.227e-01	1.0000	944.0	21.07%	5401.6	21.58%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-2.212e-01	1.0000	1494.0	33.35%	8494.3	33.94%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-2.206e-01	1.0000	312.0	6.96%	1823.8	7.29%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-2.114e-01	1.0000	3052.0	68.12%	17200.5	68.72%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-2.110e-01	1.0000	2321.0	51.81%	13128.6	52.45%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-2.035e-01	1.0000	523.0	11.67%	3029.0	12.10%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-2.004e-01	1.0000	393.0	8.77%	2292.0	9.16%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.959e-01	1.0000	593.0	13.24%	3429.2	13.70%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.931e-01	1.0000	1643.0	36.67%	9346.0	37.34%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.900e-01	1.0000	309.0	6.90%	1815.2	7.25%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.751e-01	1.0000	1927.0	43.01%	10947.5	43.74%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.747e-01	1.0000	939.0	20.96%	5396.6	21.56%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-1.712e-01	1.0000	162.0	3.62%	975.6	3.90%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.611e-01	1.0000	233.0	5.20%	1388.6	5.55%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-1.594e-01	1.0000	78.0	1.74%	487.3	1.95%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.577e-01	1.0000	2593.0	57.88%	14678.6	58.65%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.559e-01	1.0000	187.0	4.17%	1124.9	4.49%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.552e-01	1.0000	680.0	15.18%	3941.7	15.75%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-1.500e-01	1.0000	346.0	7.72%	2041.6	8.16%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.499e-01	1.0000	956.0	21.34%	5506.1	22.00%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.487e-01	1.0000	2255.0	50.33%	12799.2	51.14%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.476e-01	1.0000	2087.0	46.58%	11861.6	47.39%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.473e-01	1.0000	909.0	20.29%	5242.4	20.94%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.459e-01	1.0000	541.0	12.08%	3156.1	12.61%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.420e-01	1.0000	85.0	1.90%	532.7	2.13%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.337e-01	1.0000	379.0	8.46%	2237.4	8.94%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.317e-01	1.0000	636.0	14.20%	3704.8	14.80%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.303e-01	1.0000	597.0	13.33%	3483.4	13.92%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.254e-01	1.0000	673.0	15.02%	3918.1	15.65%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-1.245e-01	1.0000	831.0	18.55%	4815.4	19.24%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.231e-01	1.0000	937.0	20.92%	5416.7	21.64%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.180e-01	1.0000	1436.0	32.05%	8234.8	32.90%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.158e-01	1.0000	1124.0	25.09%	6478.7	25.88%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.105e-01	1.0000	1477.0	32.97%	8471.1	33.84%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-1.100e-01	1.0000	764.0	17.05%	4445.8	17.76%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.099e-01	1.0000	647.0	14.44%	3780.4	15.10%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.067e-01	1.0000	1507.0	33.64%	8643.1	34.53%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.067e-01	1.0000	527.0	11.76%	3098.9	12.38%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.049e-01	1.0000	1658.0	37.01%	9493.6	37.93%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-9.901e-02	1.0000	1319.0	29.44%	7592.6	30.33%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-9.633e-02	1.0000	200.0	4.46%	1221.8	4.88%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-9.327e-02	1.0000	308.0	6.88%	1849.3	7.39%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-9.243e-02	1.0000	1669.0	37.25%	9567.7	38.23%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-8.987e-02	1.0000	122.0	2.72%	766.9	3.06%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-8.845e-02	1.0000	863.0	19.26%	5024.7	20.08%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-8.612e-02	1.0000	3133.0	69.93%	17737.7	70.87%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-7.810e-02	1.0000	1977.0	44.13%	11310.3	45.19%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-7.656e-02	1.0000	562.0	12.54%	3320.2	13.27%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-7.512e-02	1.0000	458.0	10.22%	2725.5	10.89%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-7.041e-02	1.0000	96.0	2.14%	619.5	2.48%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-7.020e-02	1.0000	516.0	11.52%	3063.0	12.24%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-6.849e-02	1.0000	634.0	14.15%	3739.9	14.94%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-6.584e-02	1.0000	765.0	17.08%	4489.4	17.94%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-6.436e-02	1.0000	1060.0	23.66%	6166.1	24.64%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.306e-02	1.0000	269.0	6.00%	1642.8	6.56%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-6.265e-02	1.0000	576.0	12.86%	3413.4	13.64%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-5.874e-02	1.0000	1276.0	28.48%	7395.4	29.55%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-5.646e-02	1.0000	497.0	11.09%	2966.4	11.85%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-5.609e-02	1.0000	226.0	5.04%	1396.1	5.58%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-5.513e-02	1.0000	238.0	5.31%	1467.5	5.86%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-5.456e-02	1.0000	1152.0	25.71%	6700.7	26.77%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-5.151e-02	1.0000	546.0	12.19%	3253.8	13.00%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-5.092e-02	1.0000	1009.0	22.52%	5895.2	23.55%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-4.962e-02	1.0000	79.0	1.76%	526.8	2.10%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-4.700e-02	1.0000	334.0	7.46%	2034.9	8.13%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-4.430e-02	1.0000	122.0	2.72%	789.9	3.16%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-4.424e-02	1.0000	1081.0	24.13%	6314.4	25.23%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-4.136e-02	1.0000	513.0	11.45%	3076.1	12.29%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-3.965e-02	1.0000	351.0	7.83%	2141.6	8.56%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-3.896e-02	1.0000	1660.0	37.05%	9593.4	38.33%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-3.593e-02	1.0000	878.0	19.60%	5175.5	20.68%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-3.591e-02	1.0000	244.0	5.45%	1520.2	6.07%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-3.466e-02	1.0000	10.0	0.22%	92.7	0.37%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-3.334e-02	1.0000	1424.0	31.79%	8276.7	33.07%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-3.330e-02	1.0000	1015.0	22.66%	5960.7	23.81%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-3.313e-02	1.0000	145.0	3.24%	937.0	3.74%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-3.207e-02	1.0000	149.0	3.33%	961.2	3.84%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-3.058e-02	1.0000	596.0	13.30%	3571.2	14.27%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-2.814e-02	1.0000	1862.0	41.56%	10754.9	42.97%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-2.802e-02	1.0000	419.0	9.35%	2553.9	10.20%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.551e-02	1.0000	1635.0	36.50%	9486.7	37.90%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-2.469e-02	1.0000	1137.0	25.38%	6674.6	26.67%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-2.460e-02	1.0000	243.0	5.42%	1529.1	6.11%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.428e-02	1.0000	470.0	10.49%	2856.1	11.41%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.355e-02	1.0000	95.0	2.12%	643.1	2.57%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-2.330e-02	1.0000	614.0	13.71%	3690.4	14.74%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-2.274e-02	1.0000	441.0	9.84%	2691.8	10.75%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-2.138e-02	1.0000	744.0	16.61%	4442.0	17.75%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.103e-02	1.0000	682.0	15.22%	4087.2	16.33%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-2.031e-02	1.0000	218.0	4.87%	1388.7	5.55%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.950e-02	1.0000	1084.0	24.20%	6389.3	25.53%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.899e-02	1.0000	1064.0	23.75%	6277.3	25.08%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.879e-02	1.0000	72.0	1.61%	506.5	2.02%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.859e-02	1.0000	670.0	14.96%	4025.9	16.08%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-1.857e-02	1.0000	3072.0	68.57%	17519.9	70.00%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.811e-02	1.0000	122.0	2.72%	815.2	3.26%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.707e-02	1.0000	116.0	2.59%	780.4	3.12%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.624e-02	1.0000	338.0	7.54%	2105.3	8.41%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.553e-02	1.0000	283.0	6.32%	1783.3	7.12%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-1.504e-02	1.0000	855.0	19.08%	5099.5	20.37%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.457e-02	1.0000	170.0	3.79%	1112.8	4.45%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-1.284e-02	1.0000	688.0	15.36%	4149.7	16.58%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.257e-02	1.0000	1458.0	32.54%	8539.9	34.12%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-1.240e-02	1.0000	1062.0	23.71%	6293.6	25.14%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.235e-02	1.0000	1695.0	37.83%	9877.0	39.46%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.186e-02	1.0000	479.0	10.69%	2943.4	11.76%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.140e-02	1.0000	577.0	12.88%	3514.0	14.04%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.031e-02	1.0000	1023.0	22.83%	6083.0	24.30%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.030e-02	1.0000	1528.0	34.11%	8948.8	35.75%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.027e-02	1.0000	353.0	7.88%	2212.6	8.84%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.020e-02	1.0000	719.0	16.05%	4340.8	17.34%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-1.010e-02	1.0000	1738.0	38.79%	10133.5	40.49%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-9.999e-03	1.0000	2318.0	51.74%	13382.4	53.47%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-9.716e-03	1.0000	1814.0	40.49%	10563.9	42.21%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-9.108e-03	1.0000	1410.0	31.47%	8289.9	33.12%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-6.303e-03	1.0000	418.0	9.33%	2614.1	10.44%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-6.015e-03	1.0000	642.0	14.33%	3922.9	15.67%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-5.992e-03	1.0000	1265.0	28.24%	7493.8	29.94%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-5.427e-03	1.0000	828.0	18.48%	5001.2	19.98%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-5.080e-03	1.0000	1252.0	27.95%	7429.6	29.68%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-4.978e-03	1.0000	1259.0	28.10%	7470.7	29.85%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-4.785e-03	1.0000	1046.0	23.35%	6258.1	25.00%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-4.618e-03	1.0000	2176.0	48.57%	12642.0	50.51%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-4.005e-03	1.0000	1872.0	41.79%	10947.9	43.74%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-3.478e-03	1.0000	711.0	15.87%	4348.6	17.37%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.873e-03	1.0000	1403.0	31.32%	8320.8	33.24%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.537e-03	1.0000	464.0	10.36%	2921.3	11.67%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-2.279e-03	1.0000	2690.0	60.04%	15542.2	62.10%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-2.154e-03	1.0000	1136.0	25.36%	6816.2	27.23%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-2.008e-03	1.0000	603.0	13.46%	3745.8	14.97%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.920e-03	1.0000	521.0	11.63%	3267.1	13.05%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.544e-03	1.0000	806.0	17.99%	4936.5	19.72%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.316e-03	1.0000	639.0	14.26%	3973.8	15.88%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.282e-03	1.0000	139.0	3.10%	986.9	3.94%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.243e-03	1.0000	772.0	17.23%	4749.5	18.98%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-9.660e-04	1.0000	470.0	10.49%	2993.1	11.96%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-8.120e-04	1.0000	359.0	8.01%	2339.6	9.35%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-7.250e-04	1.0000	1434.0	32.01%	8571.2	34.24%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-6.820e-04	1.0000	639.0	14.26%	4000.3	15.98%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-6.000e-04	1.0000	938.0	20.94%	5742.6	22.94%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-2.170e-04	1.0000	803.0	17.92%	5003.2	19.99%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-1.380e-04	1.0000	1456.0	32.50%	8777.5	35.07%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-8.100e-05	1.0000	937.0	20.92%	5821.7	23.26%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-8.100e-05	1.0000	1589.0	35.47%	9557.2	38.18%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-4.300e-05	1.0000	1901.0	42.43%	11347.9	45.34%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-1.600e-05	1.0000	1662.0	37.10%	10041.6	40.12%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-8.000e-06	1.0000	1117.0	24.93%	6953.3	27.78%